Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 AC055811.4-201ENST00000624039 1754 ntBASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC15.8■□□□□ 0.12
CPNE8Q86YQ8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 KLF2P2-201ENST00000416807 1039 ntBASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 CLUHP6-201ENST00000580789 941 ntBASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 RN7SL204P-201ENST00000582831 262 ntBASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC15.79■□□□□ 0.12
CPNE8Q86YQ8 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 MPI-203ENST00000535694 1523 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC152010.1-201ENST00000415779 2006 ntBASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 BCRP1-201ENST00000444246 691 ntBASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 MYCLP2-201ENST00000449268 967 ntBASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC022447.6-201ENST00000515522 438 ntBASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC138761.1-201ENST00000584393 385 ntBASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 AC008494.3-201ENST00000606615 944 ntBASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CPNE8Q86YQ8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms