Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
UBE3BQ7Z3V4 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
UBE3BQ7Z3V4 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 TLE1P1-201ENST00000422965 589 ntBASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 AKR7A2P1-201ENST00000460134 915 ntBASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 SERPINA13P-202ENST00000478994 924 ntBASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 ACTG1P17-201ENST00000558391 1119 ntBASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 AC244452.3-201ENST00000636814 210 ntBASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 PARN-202ENST00000420015 2360 ntTSL 2 BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 AC092384.3-202ENST00000564646 2873 ntBASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
UBE3BQ7Z3V4 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 AC010141.1-201ENST00000411585 623 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 FNTAP2-201ENST00000430308 634 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 RNMTL1P1-201ENST00000454103 560 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 AC021723.1-201ENST00000486306 515 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 HIST2H2BC-201ENST00000498492 580 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 SCARNA20.5-201ENST00000516991 142 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 AC022748.3-201ENST00000621828 275 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 AL162426.1-201ENST00000624141 743 ntBASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
UBE3BQ7Z3V4 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
UBE3BQ7Z3V4 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms