Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 AC005229.1-201ENST00000392885 409 ntBASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 AL355864.2-201ENST00000447420 863 ntBASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 BTNL10-201ENST00000595971 695 ntBASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 AC145423.3-201ENST00000615987 467 ntBASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
LYSMD3Q7Z3D4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 AJ011931.1-201ENST00000618749 2492 ntBASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 AC018665.1-201ENST00000622927 1362 ntBASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
LYSMD3Q7Z3D4 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 ATP5G2P4-201ENST00000442175 420 ntBASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 DUX4L47-201ENST00000566374 394 ntBASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 APOC4-201ENST00000591600 348 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
LYSMD3Q7Z3D4 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms