Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 AL136295.7-201ENST00000619226 1200 ntBASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 AC004923.1-202ENST00000642106 209 ntBASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC149Q6ZUS6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SLC16A6P1-201ENST00000413214 1059 ntBASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AL596276.2-201ENST00000447525 331 ntBASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AC008267.1-201ENST00000474858 1069 ntBASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 HNRNPA1P36-201ENST00000521313 955 ntBASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 MBP-227ENST00000526111 581 ntTSL 4 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SHC1P1-201ENST00000425230 1745 ntBASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC149Q6ZUS6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 AL133499.1-201ENST00000596207 608 ntBASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 AL162426.1-201ENST00000624141 743 ntBASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 AC103702.1-201ENST00000548801 2630 ntBASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CCDC149Q6ZUS6 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms