Protein–RNA interactions for Protein: Q6UWI4

SHISA2, Protein shisa-2 homolog, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2Q6UWI4 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SHISA2Q6UWI4 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC026691.1-201ENST00000602502 2017 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AL139385.1-201ENST00000611744 3272 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 HSFY1P1-201ENST00000423928 1178 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 DNAJB1P1-201ENST00000429417 1024 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 RNMTL1P1-201ENST00000454103 560 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC125604.1-201ENST00000496255 707 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 IGLV3-15-201ENST00000518356 244 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC022616.1-201ENST00000518688 554 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 AC073352.2-201ENST00000609385 439 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 Metazoa_SRP.91-201ENST00000622745 281 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 NAP1L6-202ENST00000641404 1222 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 CICP23-201ENST00000605013 2741 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 CICP20-201ENST00000443330 2801 ntBASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SHISA2Q6UWI4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 AC022762.2-201ENST00000600308 1353 ntBASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 C1QTNF1-204ENST00000392445 2833 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SHISA2Q6UWI4 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms