Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 AL645933.1-201ENST00000440087 609 ntBASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 IGLV3-15-201ENST00000518356 244 ntBASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 AL157813.1-201ENST00000612996 587 ntBASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 AC020658.6-201ENST00000623564 1870 ntBASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TRIM71Q2Q1W2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 MYO16-AS1-201ENST00000439299 580 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 GCOM2-201ENST00000509133 1104 ntBASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AP003419.4-201ENST00000616071 517 ntBASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AC027601.3-201ENST00000622907 509 ntBASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 AC008894.3-201ENST00000624324 3103 ntBASIC16.3■□□□□ 0.2
TRIM71Q2Q1W2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 KRT8P21-201ENST00000430398 1491 ntBASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 TBC1D3J-201ENST00000620719 1426 ntBASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 AC104784.1-201ENST00000473096 294 ntBASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 AC131206.1-201ENST00000538078 1211 ntBASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 CYP4F23P-201ENST00000593402 1579 ntBASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM71Q2Q1W2 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms