Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC14.3□□□□□ -0.12
RAE1P78406 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
RAE1P78406 AC067930.6-201ENST00000623257 4947 ntBASIC14.3□□□□□ -0.12
RAE1P78406 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
RAE1P78406 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.3□□□□□ -0.12
RAE1P78406 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
RAE1P78406 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
RAE1P78406 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 TP53TG3HP-202ENST00000569755 579 ntBASIC14.29□□□□□ -0.12
RAE1P78406 AL355385.1-201ENST00000606123 409 ntBASIC14.29□□□□□ -0.12
RAE1P78406 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RAE1P78406 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 KRT8P35-201ENST00000483942 1338 ntBASIC14.29□□□□□ -0.12
RAE1P78406 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 AGGF1P1-201ENST00000509500 2073 ntBASIC14.29□□□□□ -0.12
RAE1P78406 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.29□□□□□ -0.12
RAE1P78406 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RAE1P78406 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
RAE1P78406 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.28□□□□□ -0.12
RAE1P78406 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RAE1P78406 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC14.28□□□□□ -0.12
RAE1P78406 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC14.28□□□□□ -0.12
RAE1P78406 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.28□□□□□ -0.12
RAE1P78406 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 AC117489.1-201ENST00000625169 3217 ntBASIC14.28□□□□□ -0.12
RAE1P78406 AL033527.5-201ENST00000641382 801 ntBASIC14.28□□□□□ -0.12
RAE1P78406 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RAE1P78406 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.28□□□□□ -0.12
RAE1P78406 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RAE1P78406 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.27□□□□□ -0.12
RAE1P78406 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.27□□□□□ -0.12
RAE1P78406 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.27□□□□□ -0.12
RAE1P78406 SALL4P5-201ENST00000419001 1760 ntBASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms