Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
UBA52P62987 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.17□□□□□ -0.3
UBA52P62987 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBA52P62987 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.17□□□□□ -0.3
UBA52P62987 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBA52P62987 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
UBA52P62987 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.16□□□□□ -0.3
UBA52P62987 GPR53P-205ENST00000457298 1084 ntBASIC13.16□□□□□ -0.3
UBA52P62987 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.16□□□□□ -0.3
UBA52P62987 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC13.16□□□□□ -0.3
UBA52P62987 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC13.16□□□□□ -0.3
UBA52P62987 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 AC020765.3-201ENST00000613051 740 ntBASIC13.16□□□□□ -0.3
UBA52P62987 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.16□□□□□ -0.3
UBA52P62987 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.16□□□□□ -0.3
UBA52P62987 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBA52P62987 AC138969.3-201ENST00000546612 1459 ntBASIC13.16□□□□□ -0.3
UBA52P62987 AC138932.2-201ENST00000548268 1459 ntBASIC13.16□□□□□ -0.3
UBA52P62987 AC126755.4-201ENST00000549796 1459 ntBASIC13.16□□□□□ -0.3
UBA52P62987 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBA52P62987 DGCR9-201ENST00000609630 2415 ntBASIC13.15□□□□□ -0.3
UBA52P62987 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 AL356585.2-201ENST00000625078 2396 ntBASIC13.15□□□□□ -0.3
UBA52P62987 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC13.15□□□□□ -0.3
UBA52P62987 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
UBA52P62987 AC098614.1-201ENST00000368528 745 ntBASIC13.15□□□□□ -0.3
UBA52P62987 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
UBA52P62987 RPL37AP1-201ENST00000412502 279 ntBASIC13.15□□□□□ -0.3
UBA52P62987 ARSEP1-201ENST00000420443 635 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms