Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
RPL39P62891 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RPL39P62891 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 TPT1P11-201ENST00000458482 498 ntBASIC10.74□□□□□ -0.69
RPL39P62891 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 RN7SL589P-201ENST00000481268 310 ntBASIC10.74□□□□□ -0.69
RPL39P62891 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 IGHV3-62-201ENST00000520057 340 ntBASIC10.74□□□□□ -0.69
RPL39P62891 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.74□□□□□ -0.69
RPL39P62891 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC10.74□□□□□ -0.69
RPL39P62891 IGHV3OR16-6-201ENST00000568775 360 ntBASIC10.74□□□□□ -0.69
RPL39P62891 AP001005.1-201ENST00000571755 1248 ntBASIC10.74□□□□□ -0.69
RPL39P62891 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC10.74□□□□□ -0.69
RPL39P62891 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RPL39P62891 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 AC104109.2-201ENST00000602919 1418 ntBASIC10.74□□□□□ -0.69
RPL39P62891 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.74□□□□□ -0.69
RPL39P62891 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
RPL39P62891 AC099521.3-201ENST00000624251 2938 ntBASIC10.74□□□□□ -0.69
RPL39P62891 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC10.74□□□□□ -0.69
RPL39P62891 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
RPL39P62891 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RPL39P62891 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 TP73-211ENST00000604074 4806 ntTSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 AC004899.2-201ENST00000622993 3860 ntBASIC10.73□□□□□ -0.69
RPL39P62891 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 DGCR9-201ENST00000609630 2415 ntBASIC10.73□□□□□ -0.69
RPL39P62891 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 AC130686.1-201ENST00000622936 2466 ntBASIC10.73□□□□□ -0.69
RPL39P62891 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 GALC-206ENST00000544807 2528 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 BEX3-201ENST00000361298 921 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 SPCS2P4-201ENST00000436160 681 ntBASIC10.73□□□□□ -0.69
RPL39P62891 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC10.73□□□□□ -0.69
RPL39P62891 FAM86C2P-203ENST00000528684 1004 ntBASIC10.73□□□□□ -0.69
RPL39P62891 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC10.73□□□□□ -0.69
RPL39P62891 AC243562.1-201ENST00000560672 389 ntBASIC10.73□□□□□ -0.69
RPL39P62891 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
RPL39P62891 AC015910.1-201ENST00000579400 975 ntBASIC10.73□□□□□ -0.69
RPL39P62891 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.73□□□□□ -0.69
RPL39P62891 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC10.73□□□□□ -0.69
RPL39P62891 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RPL39P62891 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RPL39P62891 AC091812.2-201ENST00000619081 385 ntBASIC10.73□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms