Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZNF259P1-201ENST00000407656 1365 ntBASIC13.2□□□□□ -0.3
CLDN12P56749 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 IL9RP2-201ENST00000423948 1312 ntBASIC13.2□□□□□ -0.3
CLDN12P56749 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CLDN12P56749 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 AC104457.1-201ENST00000401024 814 ntBASIC13.2□□□□□ -0.3
CLDN12P56749 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC13.2□□□□□ -0.3
CLDN12P56749 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 AC023090.2-201ENST00000625182 2110 ntBASIC13.2□□□□□ -0.3
CLDN12P56749 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.2□□□□□ -0.3
CLDN12P56749 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
CLDN12P56749 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.2□□□□□ -0.3
CLDN12P56749 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
CLDN12P56749 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CLDN12P56749 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
CLDN12P56749 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
CLDN12P56749 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.19□□□□□ -0.3
CLDN12P56749 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN12P56749 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN12P56749 COX5A-206ENST00000568783 571 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN12P56749 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN12P56749 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.19□□□□□ -0.3
CLDN12P56749 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 AC003101.2-201ENST00000612557 442 ntBASIC13.19□□□□□ -0.3
CLDN12P56749 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC13.19□□□□□ -0.3
CLDN12P56749 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.19□□□□□ -0.3
CLDN12P56749 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
CLDN12P56749 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms