Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.2□□□□□ -0.3
ATP1B3P54709 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
ATP1B3P54709 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
ATP1B3P54709 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
ATP1B3P54709 BEND3P1-201ENST00000421591 1944 ntBASIC13.19□□□□□ -0.3
ATP1B3P54709 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 AC027601.5-201ENST00000624065 2482 ntBASIC13.19□□□□□ -0.3
ATP1B3P54709 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATP1B3P54709 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 AL139400.1-201ENST00000366220 510 ntBASIC13.19□□□□□ -0.3
ATP1B3P54709 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 WRB-204ENST00000398753 699 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 MIR1233-2-201ENST00000408138 82 ntBASIC13.19□□□□□ -0.3
ATP1B3P54709 MIR1233-1-201ENST00000408722 82 ntBASIC13.19□□□□□ -0.3
ATP1B3P54709 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.19□□□□□ -0.3
ATP1B3P54709 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
ATP1B3P54709 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.19□□□□□ -0.3
ATP1B3P54709 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 AC015911.4-201ENST00000588022 1070 ntBASIC13.19□□□□□ -0.3
ATP1B3P54709 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.19□□□□□ -0.3
ATP1B3P54709 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ATP1B3P54709 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
ATP1B3P54709 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.19□□□□□ -0.3
ATP1B3P54709 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
ATP1B3P54709 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
ATP1B3P54709 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 AL928921.2-201ENST00000641325 2442 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 BX640514.1-201ENST00000583223 1918 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 AC104457.1-201ENST00000401024 814 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms