Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC023908.3-201ENST00000564211 3047 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.87□□□□□ -0.03
LIMK1P53667 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 AC025271.4-201ENST00000621477 1726 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 KRT8P14-201ENST00000414254 1442 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 RN7SKP214-201ENST00000364208 315 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK1P53667 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
LIMK1P53667 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK1P53667 AC104073.2-201ENST00000453737 312 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK1P53667 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 AP003171.2-201ENST00000528208 925 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC14.87□□□□□ -0.03
LIMK1P53667 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC14.87□□□□□ -0.03
LIMK1P53667 AC103810.10-201ENST00000606504 343 ntBASIC14.87□□□□□ -0.03
LIMK1P53667 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LIMK1P53667 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC14.87□□□□□ -0.03
LIMK1P53667 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.87□□□□□ -0.03
LIMK1P53667 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
LIMK1P53667 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 CICP24-201ENST00000605464 2705 ntBASIC14.86□□□□□ -0.03
LIMK1P53667 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 CYP51A1P3-201ENST00000400072 1428 ntBASIC14.86□□□□□ -0.03
LIMK1P53667 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
LIMK1P53667 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.86□□□□□ -0.03
LIMK1P53667 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC14.86□□□□□ -0.03
LIMK1P53667 PPOX-204ENST00000462866 473 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 AC090857.1-201ENST00000527400 390 ntBASIC14.86□□□□□ -0.03
LIMK1P53667 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LIMK1P53667 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.86□□□□□ -0.03
LIMK1P53667 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 FER1L4-210ENST00000615531 5998 ntBASIC14.86□□□□□ -0.03
LIMK1P53667 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LIMK1P53667 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
LIMK1P53667 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LIMK1P53667 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK1P53667 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK1P53667 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK1P53667 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.85□□□□□ -0.03
LIMK1P53667 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK1P53667 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK1P53667 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LIMK1P53667 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms