Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 AC104794.3-201ENST00000566840 1248 ntBASIC13.43□□□□□ -0.26
SLC25A1P53007 BRI3BPP1-201ENST00000594224 787 ntBASIC13.43□□□□□ -0.26
SLC25A1P53007 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC13.43□□□□□ -0.26
SLC25A1P53007 AC138649.4-201ENST00000612222 287 ntBASIC13.43□□□□□ -0.26
SLC25A1P53007 AL390754.1-201ENST00000619088 582 ntBASIC13.43□□□□□ -0.26
SLC25A1P53007 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC13.43□□□□□ -0.26
SLC25A1P53007 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
SLC25A1P53007 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.43□□□□□ -0.26
SLC25A1P53007 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
SLC25A1P53007 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.43□□□□□ -0.26
SLC25A1P53007 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.43□□□□□ -0.26
SLC25A1P53007 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
SLC25A1P53007 BEND3P1-201ENST00000421591 1944 ntBASIC13.43□□□□□ -0.26
SLC25A1P53007 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.42□□□□□ -0.26
SLC25A1P53007 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 DOC2GP-202ENST00000514950 1163 ntBASIC13.42□□□□□ -0.26
SLC25A1P53007 TPRX2P-201ENST00000535362 881 ntBASIC13.42□□□□□ -0.26
SLC25A1P53007 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.42□□□□□ -0.26
SLC25A1P53007 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC007431.3-201ENST00000623221 587 ntBASIC13.42□□□□□ -0.26
SLC25A1P53007 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
SLC25A1P53007 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.42□□□□□ -0.26
SLC25A1P53007 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.42□□□□□ -0.26
SLC25A1P53007 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SLC25A1P53007 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.41□□□□□ -0.26
SLC25A1P53007 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SLC25A1P53007 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.41□□□□□ -0.26
SLC25A1P53007 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SLC25A1P53007 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SLC25A1P53007 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms