Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC14.88□□□□□ -0.03
GTF2A1P52655 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
GTF2A1P52655 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC14.88□□□□□ -0.03
GTF2A1P52655 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GTF2A1P52655 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.88□□□□□ -0.03
GTF2A1P52655 SIGLEC30P-201ENST00000455569 941 ntBASIC14.88□□□□□ -0.03
GTF2A1P52655 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.88□□□□□ -0.03
GTF2A1P52655 AC010654.1-201ENST00000615722 808 ntBASIC14.88□□□□□ -0.03
GTF2A1P52655 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
GTF2A1P52655 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GTF2A1P52655 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.88□□□□□ -0.03
GTF2A1P52655 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 CA10-202ENST00000442502 2935 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
GTF2A1P52655 TNFRSF21-201ENST00000296861 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 ADAMTSL2-202ENST00000393060 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
GTF2A1P52655 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
GTF2A1P52655 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 LITAF-221ENST00000622633 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 AC104076.2-201ENST00000448912 469 ntBASIC14.87□□□□□ -0.03
GTF2A1P52655 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 KRT8P26-201ENST00000534154 1276 ntBASIC14.87□□□□□ -0.03
GTF2A1P52655 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.87□□□□□ -0.03
GTF2A1P52655 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.87□□□□□ -0.03
GTF2A1P52655 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 AC010969.2-201ENST00000602458 3231 ntBASIC14.87□□□□□ -0.03
GTF2A1P52655 DDR1-262ENST00000508312 3073 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC14.87□□□□□ -0.03
GTF2A1P52655 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
GTF2A1P52655 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC14.86□□□□□ -0.03
GTF2A1P52655 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GTF2A1P52655 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC14.86□□□□□ -0.03
GTF2A1P52655 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
GTF2A1P52655 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC14.86□□□□□ -0.03
GTF2A1P52655 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.86□□□□□ -0.03
GTF2A1P52655 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 AL583810.2-201ENST00000556430 3254 ntBASIC14.86□□□□□ -0.03
GTF2A1P52655 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
GTF2A1P52655 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
GTF2A1P52655 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC14.86□□□□□ -0.03
GTF2A1P52655 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.86□□□□□ -0.03
GTF2A1P52655 AL020989.1-201ENST00000422979 469 ntBASIC14.86□□□□□ -0.03
GTF2A1P52655 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC14.86□□□□□ -0.03
GTF2A1P52655 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC14.86□□□□□ -0.03
GTF2A1P52655 AC063952.2-201ENST00000498792 1227 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms