Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
USP11P51784 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
USP11P51784 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17■□□□□ 0.31
USP11P51784 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17■□□□□ 0.31
USP11P51784 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC17■□□□□ 0.31
USP11P51784 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC17■□□□□ 0.31
USP11P51784 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP11P51784 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17■□□□□ 0.31
USP11P51784 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
USP11P51784 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
USP11P51784 FAM21FP-201ENST00000426241 1131 ntBASIC17■□□□□ 0.31
USP11P51784 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 RGS5-214ENST00000429865 754 ntTSL 3 BASIC17■□□□□ 0.31
USP11P51784 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17■□□□□ 0.31
USP11P51784 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC17■□□□□ 0.31
USP11P51784 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17■□□□□ 0.31
USP11P51784 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
USP11P51784 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17■□□□□ 0.31
USP11P51784 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC17■□□□□ 0.31
USP11P51784 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17■□□□□ 0.31
USP11P51784 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
USP11P51784 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC17■□□□□ 0.31
USP11P51784 ZACNP1-201ENST00000612259 710 ntBASIC17■□□□□ 0.31
USP11P51784 FGD5P1-202ENST00000614866 2498 ntBASIC17■□□□□ 0.31
USP11P51784 MIR6752-201ENST00000618442 71 ntBASIC17■□□□□ 0.31
USP11P51784 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17■□□□□ 0.31
USP11P51784 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17■□□□□ 0.31
USP11P51784 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC17■□□□□ 0.31
USP11P51784 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
USP11P51784 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17■□□□□ 0.31
USP11P51784 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
USP11P51784 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
USP11P51784 AC068587.6-202ENST00000641839 5619 ntBASIC17■□□□□ 0.31
USP11P51784 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 RPS2P32-201ENST00000439199 892 ntBASIC16.99■□□□□ 0.31
USP11P51784 BNIP3P42-201ENST00000454982 569 ntBASIC16.99■□□□□ 0.31
USP11P51784 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.99■□□□□ 0.31
USP11P51784 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 AL583810.1-201ENST00000553344 1045 ntBASIC16.99■□□□□ 0.31
USP11P51784 BNIP3P29-201ENST00000598302 571 ntBASIC16.99■□□□□ 0.31
USP11P51784 BX088702.1-201ENST00000610784 235 ntBASIC16.99■□□□□ 0.31
USP11P51784 AC011447.5-201ENST00000616168 564 ntBASIC16.99■□□□□ 0.31
USP11P51784 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC16.99■□□□□ 0.31
USP11P51784 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
USP11P51784 AC020910.5-201ENST00000623668 1865 ntBASIC16.99■□□□□ 0.31
USP11P51784 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
USP11P51784 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
USP11P51784 AP002414.2-201ENST00000591780 3365 ntBASIC16.98■□□□□ 0.31
USP11P51784 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms