Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PCP4P48539 AC008555.2-202ENST00000601776 5302 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 ACOX2-201ENST00000302819 2426 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 AKT1-208ENST00000554581 3916 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PCP4P48539 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC9.92□□□□□ -0.82
PCP4P48539 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
PCP4P48539 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 RN7SL832P-201ENST00000607781 1756 ntBASIC9.92□□□□□ -0.82
PCP4P48539 AL035252.3-201ENST00000613361 2784 ntBASIC9.92□□□□□ -0.82
PCP4P48539 KCNAB1-201ENST00000302490 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 SNHG3-202ENST00000437681 2614 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 AWAT2-201ENST00000276101 2124 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 FCGR2B-202ENST00000358671 2115 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 PCNT-201ENST00000359568 10560 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
PCP4P48539 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 ERICH3-201ENST00000326665 7159 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 DPP4-201ENST00000360534 3904 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 HLA-V-203ENST00000457107 4814 ntBASIC9.92□□□□□ -0.82
PCP4P48539 NSD3-202ENST00000317025 10776 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 STRADA-201ENST00000245865 2959 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC9.92□□□□□ -0.82
PCP4P48539 ACSBG1-214ENST00000560817 2462 ntTSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 KIAA1683-206ENST00000600328 3819 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 ACSF3-218ENST00000614302 3751 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 LINC01015-203ENST00000434657 2874 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 ENO4-205ENST00000622726 2874 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
PCP4P48539 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC9.92□□□□□ -0.82
PCP4P48539 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC9.92□□□□□ -0.82
PCP4P48539 BEND3P1-202ENST00000449695 2762 ntTSL 4 BASIC9.92□□□□□ -0.82
PCP4P48539 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 AL353732.1-201ENST00000569618 1459 ntBASIC9.91□□□□□ -0.82
PCP4P48539 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 AIF1L-207ENST00000372309 3515 ntTSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 FAM172A-201ENST00000395965 4312 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 BAG6-234ENST00000211379 3779 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 MAP3K3-208ENST00000579585 3352 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 REST-206ENST00000612429 1376 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 REST-207ENST00000616975 1370 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 ADAMTS7P3-201ENST00000566116 3716 ntBASIC9.91□□□□□ -0.82
PCP4P48539 KCNB1-201ENST00000371741 11879 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
PCP4P48539 HS6ST2-202ENST00000370836 4441 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 AL355482.1-201ENST00000411509 2463 ntTSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 AC093627.7-201ENST00000567533 3208 ntBASIC9.91□□□□□ -0.82
PCP4P48539 SPG11-201ENST00000261866 7774 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 TSPYL2-201ENST00000375442 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 SLC35B4-201ENST00000378509 6797 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 LASP1-204ENST00000435347 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC9.91□□□□□ -0.82
PCP4P48539 RBM38-205ENST00000440234 686 ntTSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 DUTP2-201ENST00000519164 463 ntBASIC9.91□□□□□ -0.82
PCP4P48539 MED25-210ENST00000612854 801 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 MED25-214ENST00000622402 642 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 HDAC6-201ENST00000334136 4190 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 Z94160.1-201ENST00000445088 1965 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 HERC2P2-201ENST00000613386 5181 ntBASIC9.91□□□□□ -0.82
PCP4P48539 SHANK2-201ENST00000338508 7271 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 AC022167.2-201ENST00000565934 2288 ntTSL 3 BASIC9.91□□□□□ -0.82
PCP4P48539 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC9.91□□□□□ -0.82
PCP4P48539 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 SH3KBP1-203ENST00000379716 3819 ntTSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 ATP1A1-211ENST00000537345 3763 ntAPPRIS ALT1 TSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
PCP4P48539 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC9.91□□□□□ -0.82
PCP4P48539 GAS2L1P1-201ENST00000420145 1480 ntBASIC9.91□□□□□ -0.82
PCP4P48539 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms