Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 AC104306.2-201ENST00000451877 341 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC14.25□□□□□ -0.13
GABRA4P48169 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 CDC23-208ENST00000505120 455 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 FAM8A2P-201ENST00000528813 1142 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 AC104982.3-201ENST00000581995 514 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 AL008638.5-201ENST00000623814 1298 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 AGAP7P-201ENST00000582299 2062 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 AGAP14-201ENST00000624701 2060 ntBASIC14.25□□□□□ -0.13
GABRA4P48169 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
GABRA4P48169 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
GABRA4P48169 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
GABRA4P48169 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
GABRA4P48169 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 AC023157.3-201ENST00000619086 2088 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.24□□□□□ -0.13
GABRA4P48169 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 AC020907.1-201ENST00000616460 1350 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.24□□□□□ -0.13
GABRA4P48169 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.24□□□□□ -0.13
GABRA4P48169 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC14.24□□□□□ -0.13
GABRA4P48169 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC14.24□□□□□ -0.13
GABRA4P48169 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.24□□□□□ -0.13
GABRA4P48169 AL354877.1-201ENST00000424412 413 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 AC022494.1-201ENST00000466044 728 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 ALG3P1-201ENST00000508806 1114 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
GABRA4P48169 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC14.24□□□□□ -0.13
GABRA4P48169 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.24□□□□□ -0.13
GABRA4P48169 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.24□□□□□ -0.13
GABRA4P48169 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 AL118558.3-201ENST00000607414 1079 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 GPR182-203ENST00000622922 591 ntBASIC14.24□□□□□ -0.13
GABRA4P48169 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
GABRA4P48169 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
GABRA4P48169 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
GABRA4P48169 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
GABRA4P48169 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
GABRA4P48169 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms