Protein–RNA interactions for Protein: P47992

XCL1, Lymphotactin, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1P47992 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.48□□□□□ -0.73
XCL1P47992 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.48□□□□□ -0.73
XCL1P47992 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC10.48□□□□□ -0.73
XCL1P47992 LINC00628-201ENST00000628516 1289 ntBASIC10.48□□□□□ -0.73
XCL1P47992 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
XCL1P47992 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC10.48□□□□□ -0.73
XCL1P47992 AP000845.1-201ENST00000581677 2131 ntBASIC10.48□□□□□ -0.73
XCL1P47992 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
XCL1P47992 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
XCL1P47992 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC10.48□□□□□ -0.73
XCL1P47992 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
XCL1P47992 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 TK1-203ENST00000588734 1681 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 GRAMD4P3-201ENST00000621665 1669 ntBASIC10.47□□□□□ -0.73
XCL1P47992 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 REXO1L2P-201ENST00000425429 2069 ntBASIC10.47□□□□□ -0.73
XCL1P47992 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 GHSR-202ENST00000427970 912 ntBASIC10.47□□□□□ -0.73
XCL1P47992 COX10-202ENST00000429152 875 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC10.47□□□□□ -0.73
XCL1P47992 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC10.47□□□□□ -0.73
XCL1P47992 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 AC015910.1-201ENST00000579400 975 ntBASIC10.47□□□□□ -0.73
XCL1P47992 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 AL671883.3-201ENST00000603274 991 ntBASIC10.47□□□□□ -0.73
XCL1P47992 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC10.47□□□□□ -0.73
XCL1P47992 AL033527.5-202ENST00000641632 1098 ntBASIC10.47□□□□□ -0.73
XCL1P47992 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC10.47□□□□□ -0.73
XCL1P47992 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
XCL1P47992 DEK-201ENST00000244776 1441 ntTSL 2 BASIC10.47□□□□□ -0.73
XCL1P47992 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms