Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RN7SKP175-201ENST00000408472 289 ntBASIC17.72■□□□□ 0.43
NEDD4P46934 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 FAM8A4P-201ENST00000435433 1213 ntBASIC17.72■□□□□ 0.43
NEDD4P46934 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.72■□□□□ 0.43
NEDD4P46934 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
NEDD4P46934 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
NEDD4P46934 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC17.72■□□□□ 0.43
NEDD4P46934 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.72■□□□□ 0.43
NEDD4P46934 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.71■□□□□ 0.43
NEDD4P46934 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 MTHFR-210ENST00000641407 2387 ntBASIC17.71■□□□□ 0.43
NEDD4P46934 AHCYP2-201ENST00000430630 1300 ntBASIC17.71■□□□□ 0.43
NEDD4P46934 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC17.71■□□□□ 0.43
NEDD4P46934 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
NEDD4P46934 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
NEDD4P46934 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 AL390755.1-201ENST00000623716 2027 ntBASIC17.71■□□□□ 0.43
NEDD4P46934 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
NEDD4P46934 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.71■□□□□ 0.43
NEDD4P46934 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
NEDD4P46934 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
NEDD4P46934 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
NEDD4P46934 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
NEDD4P46934 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.71■□□□□ 0.42
NEDD4P46934 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.71■□□□□ 0.42
NEDD4P46934 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
NEDD4P46934 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
NEDD4P46934 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
NEDD4P46934 AC007969.1-201ENST00000433675 447 ntBASIC17.71■□□□□ 0.42
NEDD4P46934 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC17.71■□□□□ 0.42
NEDD4P46934 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.71■□□□□ 0.42
NEDD4P46934 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.71■□□□□ 0.42
NEDD4P46934 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.71■□□□□ 0.42
NEDD4P46934 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.71■□□□□ 0.42
NEDD4P46934 AL008721.1-201ENST00000609964 604 ntBASIC17.71■□□□□ 0.42
NEDD4P46934 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.71■□□□□ 0.42
NEDD4P46934 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
NEDD4P46934 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.71■□□□□ 0.42
NEDD4P46934 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
NEDD4P46934 ANKRD30BP2-201ENST00000435744 1610 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
NEDD4P46934 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 SALL4P5-201ENST00000419001 1760 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 AP000593.2-201ENST00000542775 1433 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
NEDD4P46934 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
NEDD4P46934 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC17.7■□□□□ 0.42
NEDD4P46934 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
NEDD4P46934 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
NEDD4P46934 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 CNN2P10-201ENST00000443067 918 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 COX5BP1-201ENST00000507622 393 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.7■□□□□ 0.42
NEDD4P46934 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC17.7■□□□□ 0.42
NEDD4P46934 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
NEDD4P46934 AP006547.1-201ENST00000563435 692 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.7■□□□□ 0.42
NEDD4P46934 MIR4683-201ENST00000579659 81 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.7■□□□□ 0.42
NEDD4P46934 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC17.7■□□□□ 0.42
NEDD4P46934 AC009542.2-202ENST00000619004 1067 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 TSPY26P-202ENST00000565928 3884 ntBASIC17.7■□□□□ 0.42
NEDD4P46934 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
NEDD4P46934 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC17.69■□□□□ 0.42
NEDD4P46934 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
NEDD4P46934 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NEDD4P46934 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms