Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.37■□□□□ 0.53
TM4SF1P30408 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF1P30408 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TM4SF1P30408 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF1P30408 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.37■□□□□ 0.53
TM4SF1P30408 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TM4SF1P30408 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.36■□□□□ 0.53
TM4SF1P30408 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF1P30408 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TM4SF1P30408 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC18.36■□□□□ 0.53
TM4SF1P30408 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.36■□□□□ 0.53
TM4SF1P30408 NSD1-211ENST00000511258 809 ntTSL 3 BASIC18.36■□□□□ 0.53
TM4SF1P30408 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 ALG1L13P-202ENST00000519320 584 ntBASIC18.36■□□□□ 0.53
TM4SF1P30408 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.36■□□□□ 0.53
TM4SF1P30408 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF1P30408 RN7SL596P-201ENST00000582123 288 ntBASIC18.36■□□□□ 0.53
TM4SF1P30408 DBP-202ENST00000593500 712 ntTSL 2 BASIC18.36■□□□□ 0.53
TM4SF1P30408 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC18.36■□□□□ 0.53
TM4SF1P30408 AC138466.5-201ENST00000624002 808 ntBASIC18.36■□□□□ 0.53
TM4SF1P30408 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TM4SF1P30408 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TM4SF1P30408 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 R3HDM2P2-201ENST00000401880 2116 ntBASIC18.35■□□□□ 0.53
TM4SF1P30408 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 MROH4P-201ENST00000431302 1578 ntBASIC18.35■□□□□ 0.53
TM4SF1P30408 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF1P30408 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
TM4SF1P30408 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 KRT17P5-201ENST00000332088 839 ntBASIC18.35■□□□□ 0.53
TM4SF1P30408 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC18.35■□□□□ 0.53
TM4SF1P30408 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC18.35■□□□□ 0.53
TM4SF1P30408 RN7SL530P-201ENST00000485097 298 ntBASIC18.35■□□□□ 0.53
TM4SF1P30408 AC084752.1-201ENST00000509766 622 ntBASIC18.35■□□□□ 0.53
TM4SF1P30408 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 UXT-AS1-202ENST00000591832 565 ntTSL 4 BASIC18.35■□□□□ 0.53
TM4SF1P30408 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
TM4SF1P30408 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
TM4SF1P30408 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TM4SF1P30408 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
TM4SF1P30408 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TM4SF1P30408 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF1P30408 AL590440.2-201ENST00000641973 1595 ntBASIC18.34■□□□□ 0.53
TM4SF1P30408 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
TM4SF1P30408 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF1P30408 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF1P30408 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 SERF2-206ENST00000409291 807 ntTSL 3 BASIC18.34■□□□□ 0.53
TM4SF1P30408 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF1P30408 BCAS2P2-201ENST00000425064 674 ntBASIC18.34■□□□□ 0.53
TM4SF1P30408 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.34■□□□□ 0.53
TM4SF1P30408 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.34■□□□□ 0.53
TM4SF1P30408 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TM4SF1P30408 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC18.34■□□□□ 0.53
TM4SF1P30408 RN7SL396P-201ENST00000471086 295 ntBASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms