Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.7□□□□□ -0.22
GDF1P27539 HOMER2P2-201ENST00000451621 847 ntBASIC13.7□□□□□ -0.22
GDF1P27539 RPL13AP20-201ENST00000459725 609 ntBASIC13.7□□□□□ -0.22
GDF1P27539 COX5BP1-201ENST00000507622 393 ntBASIC13.7□□□□□ -0.22
GDF1P27539 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDF1P27539 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.7□□□□□ -0.22
GDF1P27539 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
GDF1P27539 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 MROH4P-201ENST00000431302 1578 ntBASIC13.7□□□□□ -0.22
GDF1P27539 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.7□□□□□ -0.22
GDF1P27539 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.7□□□□□ -0.22
GDF1P27539 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 LILRP1-201ENST00000444199 1370 ntBASIC13.7□□□□□ -0.22
GDF1P27539 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
GDF1P27539 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 AC073347.1-201ENST00000421633 2643 ntBASIC13.69□□□□□ -0.22
GDF1P27539 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.69□□□□□ -0.22
GDF1P27539 FAM86MP-201ENST00000340703 885 ntBASIC13.69□□□□□ -0.22
GDF1P27539 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.69□□□□□ -0.22
GDF1P27539 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 Z93015.1-201ENST00000451718 390 ntBASIC13.69□□□□□ -0.22
GDF1P27539 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.69□□□□□ -0.22
GDF1P27539 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.69□□□□□ -0.22
GDF1P27539 FTLP10-202ENST00000505798 471 ntBASIC13.69□□□□□ -0.22
GDF1P27539 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 AP006547.1-201ENST00000563435 692 ntBASIC13.69□□□□□ -0.22
GDF1P27539 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.69□□□□□ -0.22
GDF1P27539 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC13.69□□□□□ -0.22
GDF1P27539 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
GDF1P27539 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
GDF1P27539 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.69□□□□□ -0.22
GDF1P27539 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
GDF1P27539 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
GDF1P27539 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
GDF1P27539 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.68□□□□□ -0.22
GDF1P27539 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms