Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX1P22670 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RFX1P22670 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.48■□□□□ 0.23
RFX1P22670 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC16.48■□□□□ 0.23
RFX1P22670 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16.48■□□□□ 0.23
RFX1P22670 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.48■□□□□ 0.23
RFX1P22670 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX1P22670 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.48■□□□□ 0.23
RFX1P22670 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX1P22670 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.48■□□□□ 0.23
RFX1P22670 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.48■□□□□ 0.23
RFX1P22670 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
RFX1P22670 WNT11-204ENST00000621122 789 ntTSL 5 BASIC16.48■□□□□ 0.23
RFX1P22670 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 TOM1L2-205ENST00000478943 2098 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX1P22670 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX1P22670 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX1P22670 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
RFX1P22670 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC16.48■□□□□ 0.23
RFX1P22670 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
RFX1P22670 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
RFX1P22670 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX1P22670 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 APOA1-205ENST00000375329 927 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 HCG24-202ENST00000414398 717 ntTSL 3 BASIC16.47■□□□□ 0.23
RFX1P22670 AL355864.2-201ENST00000447420 863 ntBASIC16.47■□□□□ 0.23
RFX1P22670 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
RFX1P22670 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 AL049840.4-201ENST00000602422 811 ntBASIC16.47■□□□□ 0.23
RFX1P22670 AC107373.2-201ENST00000607735 490 ntBASIC16.47■□□□□ 0.23
RFX1P22670 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 SLC9A7P1-202ENST00000556476 2239 ntBASIC16.47■□□□□ 0.23
RFX1P22670 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX1P22670 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC16.47■□□□□ 0.23
RFX1P22670 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.47■□□□□ 0.23
RFX1P22670 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
RFX1P22670 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
RFX1P22670 CICP14-201ENST00000629111 2732 ntBASIC16.47■□□□□ 0.23
RFX1P22670 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.46■□□□□ 0.23
RFX1P22670 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
RFX1P22670 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RFX1P22670 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.46■□□□□ 0.23
RFX1P22670 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.46■□□□□ 0.23
RFX1P22670 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.46■□□□□ 0.23
RFX1P22670 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.46■□□□□ 0.23
RFX1P22670 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
RFX1P22670 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
RFX1P22670 AC092506.1-202ENST00000401022 528 ntBASIC16.46■□□□□ 0.23
RFX1P22670 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.46■□□□□ 0.23
RFX1P22670 NUS1P3-201ENST00000423502 862 ntBASIC16.46■□□□□ 0.23
RFX1P22670 BCRP2-202ENST00000447763 634 ntBASIC16.46■□□□□ 0.23
RFX1P22670 RN7SL399P-201ENST00000471648 279 ntBASIC16.46■□□□□ 0.23
RFX1P22670 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.46■□□□□ 0.23
RFX1P22670 BCRP6-201ENST00000510112 632 ntBASIC16.46■□□□□ 0.23
RFX1P22670 BCRP7-201ENST00000511549 544 ntBASIC16.46■□□□□ 0.23
RFX1P22670 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms