Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 ACTG1P3-201ENST00000431775 1114 ntBASIC15.27■□□□□ 0.04
HLA-DPA1P20036 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.27■□□□□ 0.04
HLA-DPA1P20036 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 AC023824.1-201ENST00000562945 2975 ntBASIC15.27■□□□□ 0.03
HLA-DPA1P20036 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
HLA-DPA1P20036 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 EIF3FP3-201ENST00000434851 1086 ntBASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 RN7SL752P-201ENST00000463779 287 ntBASIC15.26■□□□□ 0.03
HLA-DPA1P20036 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 PTP4A1P2-201ENST00000546033 454 ntBASIC15.26■□□□□ 0.03
HLA-DPA1P20036 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AC010319.3-201ENST00000597028 470 ntBASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AC012645.4-201ENST00000610691 1061 ntBASIC15.26■□□□□ 0.03
HLA-DPA1P20036 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 AC055811.4-201ENST00000624039 1754 ntBASIC15.26■□□□□ 0.03
HLA-DPA1P20036 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.26■□□□□ 0.03
HLA-DPA1P20036 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC099063.4-201ENST00000641099 1602 ntBASIC15.25■□□□□ 0.03
HLA-DPA1P20036 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC023090.2-201ENST00000625182 2110 ntBASIC15.25■□□□□ 0.03
HLA-DPA1P20036 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC012441.1-201ENST00000446669 685 ntBASIC15.25■□□□□ 0.03
HLA-DPA1P20036 RN7SL692P-201ENST00000464677 288 ntBASIC15.25■□□□□ 0.03
HLA-DPA1P20036 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms