Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC3P19447 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
ERCC3P19447 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
ERCC3P19447 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
ERCC3P19447 POM121L8P-201ENST00000417732 1281 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC3P19447 HLA-DPB2-205ENST00000435074 1188 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 POM121L9P-203ENST00000441984 1285 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC17.5■□□□□ 0.39
ERCC3P19447 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 AC126915.1-201ENST00000522847 1038 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 SAMD11P1-201ENST00000571429 661 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 PPY2P-201ENST00000582808 702 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 NKG7-204ENST00000595217 816 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 OR10B1P-201ENST00000601666 907 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 AC106872.11-201ENST00000605838 421 ntBASIC17.5■□□□□ 0.39
ERCC3P19447 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.5■□□□□ 0.39
ERCC3P19447 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.5■□□□□ 0.39
ERCC3P19447 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
ERCC3P19447 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.49■□□□□ 0.39
ERCC3P19447 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
ERCC3P19447 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC3P19447 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.49■□□□□ 0.39
ERCC3P19447 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ERCC3P19447 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.49■□□□□ 0.39
ERCC3P19447 AC022616.1-201ENST00000518688 554 ntBASIC17.49■□□□□ 0.39
ERCC3P19447 AP003171.2-201ENST00000528208 925 ntBASIC17.49■□□□□ 0.39
ERCC3P19447 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC17.49■□□□□ 0.39
ERCC3P19447 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC3P19447 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC3P19447 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC17.49■□□□□ 0.39
ERCC3P19447 RN7SL713P-201ENST00000582127 302 ntBASIC17.49■□□□□ 0.39
ERCC3P19447 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.49■□□□□ 0.39
ERCC3P19447 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ERCC3P19447 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
ERCC3P19447 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 AC126177.1-201ENST00000547829 2218 ntBASIC17.49■□□□□ 0.39
ERCC3P19447 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
ERCC3P19447 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC17.49■□□□□ 0.39
ERCC3P19447 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.49■□□□□ 0.39
ERCC3P19447 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
ERCC3P19447 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
ERCC3P19447 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
ERCC3P19447 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
ERCC3P19447 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC3P19447 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC17.48■□□□□ 0.39
ERCC3P19447 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.48■□□□□ 0.39
ERCC3P19447 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC17.48■□□□□ 0.39
ERCC3P19447 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
ERCC3P19447 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.48■□□□□ 0.39
ERCC3P19447 AC073413.1-201ENST00000603927 732 ntBASIC17.48■□□□□ 0.39
ERCC3P19447 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.48■□□□□ 0.39
ERCC3P19447 AL645728.2-202ENST00000641679 227 ntBASIC17.48■□□□□ 0.39
ERCC3P19447 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms