Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 BEND3P1-201ENST00000421591 1944 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.96□□□□□ -0.01
COL6A2P12110 TSSK5P-201ENST00000423978 907 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.96□□□□□ -0.01
COL6A2P12110 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.96□□□□□ -0.01
COL6A2P12110 AC022447.6-201ENST00000515522 438 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC14.96□□□□□ -0.01
COL6A2P12110 RARRES2P5-201ENST00000564013 466 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 PRR29-204ENST00000577953 565 ntTSL 4 BASIC14.96□□□□□ -0.01
COL6A2P12110 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.96□□□□□ -0.01
COL6A2P12110 SRD5A3P1-201ENST00000603021 949 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 AC093813.1-201ENST00000605066 256 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 PRSS30P-206ENST00000641773 873 ntBASIC14.96□□□□□ -0.01
COL6A2P12110 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
COL6A2P12110 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
COL6A2P12110 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
COL6A2P12110 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COL6A2P12110 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
COL6A2P12110 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
COL6A2P12110 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.02
COL6A2P12110 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL6A2P12110 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.96□□□□□ -0.02
COL6A2P12110 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
COL6A2P12110 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
COL6A2P12110 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
COL6A2P12110 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.96□□□□□ -0.02
COL6A2P12110 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL6A2P12110 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 CR383656.2-201ENST00000548656 2254 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL6A2P12110 AC067750.1-201ENST00000608826 6545 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COL6A2P12110 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COL6A2P12110 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.95□□□□□ -0.02
COL6A2P12110 TREML5P-201ENST00000421694 576 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.95□□□□□ -0.02
COL6A2P12110 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.95□□□□□ -0.02
COL6A2P12110 FAM86LP-201ENST00000478302 853 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.95□□□□□ -0.02
COL6A2P12110 AC009407.1-201ENST00000568958 598 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 AC036164.1-201ENST00000570544 333 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
COL6A2P12110 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
COL6A2P12110 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC14.95□□□□□ -0.02
COL6A2P12110 AC107373.2-201ENST00000607735 490 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 AGGF1P1-201ENST00000509500 2073 ntBASIC14.95□□□□□ -0.02
COL6A2P12110 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
COL6A2P12110 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.95□□□□□ -0.02
COL6A2P12110 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COL6A2P12110 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COL6A2P12110 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.94□□□□□ -0.02
COL6A2P12110 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COL6A2P12110 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL6A2P12110 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL6A2P12110 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
COL6A2P12110 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COL6A2P12110 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms