Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.97□□□□□ -0.01
CAPN1P07384 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
CAPN1P07384 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
CAPN1P07384 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.97□□□□□ -0.01
CAPN1P07384 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
CAPN1P07384 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.96□□□□□ -0.01
CAPN1P07384 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.96□□□□□ -0.01
CAPN1P07384 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.96□□□□□ -0.01
CAPN1P07384 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.96□□□□□ -0.01
CAPN1P07384 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.96□□□□□ -0.01
CAPN1P07384 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.96□□□□□ -0.01
CAPN1P07384 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.96□□□□□ -0.01
CAPN1P07384 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC14.96□□□□□ -0.01
CAPN1P07384 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CAPN1P07384 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
CAPN1P07384 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
CAPN1P07384 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CAPN1P07384 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 AL359258.3-201ENST00000622910 2331 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC14.95□□□□□ -0.02
CAPN1P07384 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CAPN1P07384 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CAPN1P07384 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 RN7SL399P-201ENST00000471648 279 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
CAPN1P07384 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.95□□□□□ -0.02
CAPN1P07384 AL359881.2-201ENST00000602973 570 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.95□□□□□ -0.02
CAPN1P07384 AL162274.1-201ENST00000617191 1098 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 REXO1L4P-201ENST00000605109 1937 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.95□□□□□ -0.02
CAPN1P07384 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.95□□□□□ -0.02
CAPN1P07384 OR2I1P-209ENST00000641730 5365 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CAPN1P07384 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.95□□□□□ -0.02
CAPN1P07384 AC012508.2-201ENST00000567613 1472 ntBASIC14.95□□□□□ -0.02
CAPN1P07384 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CAPN1P07384 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms