Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC139712.1-201ENST00000378256 1875 ntBASIC19.32■□□□□ 0.68
COL5A2P05997 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
COL5A2P05997 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.31■□□□□ 0.68
COL5A2P05997 AQP7P5-201ENST00000428759 1049 ntBASIC19.31■□□□□ 0.68
COL5A2P05997 AQP7P4-201ENST00000447083 1042 ntBASIC19.31■□□□□ 0.68
COL5A2P05997 AQP7P2-201ENST00000453967 1041 ntBASIC19.31■□□□□ 0.68
COL5A2P05997 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC19.31■□□□□ 0.68
COL5A2P05997 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 AQP7P3-201ENST00000624547 1041 ntBASIC19.31■□□□□ 0.68
COL5A2P05997 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
COL5A2P05997 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 AL136172.1-201ENST00000598590 1394 ntBASIC19.31■□□□□ 0.68
COL5A2P05997 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 AC025183.3-201ENST00000623526 1482 ntBASIC19.31■□□□□ 0.68
COL5A2P05997 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
COL5A2P05997 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
COL5A2P05997 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
COL5A2P05997 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
COL5A2P05997 KHSRPP1-201ENST00000427983 1768 ntBASIC19.3■□□□□ 0.68
COL5A2P05997 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
COL5A2P05997 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 PYY2-201ENST00000315776 282 ntBASIC19.3■□□□□ 0.68
COL5A2P05997 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
COL5A2P05997 KRTAP1-3-201ENST00000344363 972 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
COL5A2P05997 AL935212.1-201ENST00000377548 906 ntTSL 5 BASIC19.3■□□□□ 0.68
COL5A2P05997 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC19.3■□□□□ 0.68
COL5A2P05997 KRT17P4-201ENST00000429445 819 ntBASIC19.3■□□□□ 0.68
COL5A2P05997 DDX39AP1-201ENST00000445147 1181 ntBASIC19.3■□□□□ 0.68
COL5A2P05997 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC19.3■□□□□ 0.68
COL5A2P05997 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 AC007250.1-201ENST00000608934 338 ntBASIC19.3■□□□□ 0.68
COL5A2P05997 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC19.3■□□□□ 0.68
COL5A2P05997 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.3■□□□□ 0.68
COL5A2P05997 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.3■□□□□ 0.68
COL5A2P05997 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC19.3■□□□□ 0.68
COL5A2P05997 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
COL5A2P05997 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.29■□□□□ 0.68
COL5A2P05997 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC19.29■□□□□ 0.68
COL5A2P05997 AC093826.1-201ENST00000508655 993 ntBASIC19.29■□□□□ 0.68
COL5A2P05997 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC19.29■□□□□ 0.68
COL5A2P05997 OR5BD1P-201ENST00000532527 817 ntBASIC19.29■□□□□ 0.68
COL5A2P05997 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.29■□□□□ 0.68
COL5A2P05997 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC19.29■□□□□ 0.68
COL5A2P05997 AP003392.6-201ENST00000607709 325 ntBASIC19.29■□□□□ 0.68
COL5A2P05997 CSAG3-203ENST00000638835 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 CSAG2-204ENST00000640702 793 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
COL5A2P05997 FTX-216ENST00000638985 1367 ntTSL 5 BASIC19.29■□□□□ 0.68
COL5A2P05997 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC19.29■□□□□ 0.68
COL5A2P05997 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.29■□□□□ 0.68
COL5A2P05997 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
COL5A2P05997 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
COL5A2P05997 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC19.29■□□□□ 0.68
COL5A2P05997 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms