Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CD74P04233 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 AC005562.1-201ENST00000583030 3219 ntBASIC12.73□□□□□ -0.37
CD74P04233 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 AC015922.1-201ENST00000421102 1152 ntBASIC12.73□□□□□ -0.37
CD74P04233 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.73□□□□□ -0.37
CD74P04233 AC007967.2-201ENST00000432613 625 ntBASIC12.73□□□□□ -0.37
CD74P04233 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.73□□□□□ -0.37
CD74P04233 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.73□□□□□ -0.37
CD74P04233 AP001005.1-201ENST00000571755 1248 ntBASIC12.73□□□□□ -0.37
CD74P04233 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.73□□□□□ -0.37
CD74P04233 AL133215.2-201ENST00000609242 977 ntBASIC12.73□□□□□ -0.37
CD74P04233 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 AC092865.6-201ENST00000642101 219 ntBASIC12.73□□□□□ -0.37
CD74P04233 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 CLASP2-203ENST00000359576 7141 ntAPPRIS P5 TSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 AC012617.1-204ENST00000586340 2305 ntBASIC12.73□□□□□ -0.37
CD74P04233 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CD74P04233 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CD74P04233 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC12.73□□□□□ -0.37
CD74P04233 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CD74P04233 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CD74P04233 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CD74P04233 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CD74P04233 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 AC104109.2-201ENST00000602919 1418 ntBASIC12.72□□□□□ -0.37
CD74P04233 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 RPS19-201ENST00000221975 500 ntTSL 3 BASIC12.72□□□□□ -0.37
CD74P04233 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
CD74P04233 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.72□□□□□ -0.37
CD74P04233 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CD74P04233 WDR88-203ENST00000592765 651 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
CD74P04233 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CD74P04233 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.72□□□□□ -0.37
CD74P04233 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CD74P04233 UXT-AS1-201ENST00000590504 1525 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms