Protein–RNA interactions for Protein: P04003

C4BPA, C4b-binding protein alpha chain, humanhuman

Known RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4BPAP04003 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4BPAP04003 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4BPAP04003 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
C4BPAP04003 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C4BPAP04003 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.13■□□□□ 0.17
C4BPAP04003 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
C4BPAP04003 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 AC022210.1-201ENST00000449856 793 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 AC119751.2-201ENST00000504529 210 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.13■□□□□ 0.17
C4BPAP04003 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
C4BPAP04003 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.13■□□□□ 0.17
C4BPAP04003 OR10B1P-201ENST00000601666 907 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 AC239800.4-201ENST00000603712 296 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.13■□□□□ 0.17
C4BPAP04003 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 AC009093.2-202ENST00000620513 2079 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
C4BPAP04003 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 LINC00552-201ENST00000625151 2579 ntBASIC16.13■□□□□ 0.17
C4BPAP04003 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
C4BPAP04003 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 AC007292.2-201ENST00000593524 1812 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.12■□□□□ 0.17
C4BPAP04003 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
C4BPAP04003 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.12■□□□□ 0.17
C4BPAP04003 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 RN7SKP175-201ENST00000408472 289 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 MIR1202-201ENST00000408529 83 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 AC004945.1-201ENST00000416738 983 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.12■□□□□ 0.17
C4BPAP04003 GPR53P-205ENST00000457298 1084 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.12■□□□□ 0.17
C4BPAP04003 AC104989.1-201ENST00000519711 778 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC16.12■□□□□ 0.17
C4BPAP04003 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.12■□□□□ 0.17
C4BPAP04003 C2orf69P2-201ENST00000562032 1123 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC16.12■□□□□ 0.17
C4BPAP04003 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.12■□□□□ 0.17
C4BPAP04003 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
C4BPAP04003 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.12■□□□□ 0.17
C4BPAP04003 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC16.12■□□□□ 0.17
C4BPAP04003 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC16.12■□□□□ 0.17
C4BPAP04003 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 AC140479.7-201ENST00000636301 2332 ntBASIC16.12■□□□□ 0.17
C4BPAP04003 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C4BPAP04003 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC16.12■□□□□ 0.17
C4BPAP04003 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC16.11■□□□□ 0.17
C4BPAP04003 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.11■□□□□ 0.17
C4BPAP04003 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
C4BPAP04003 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
C4BPAP04003 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 AL354702.1-201ENST00000442006 1960 ntBASIC16.11■□□□□ 0.17
C4BPAP04003 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC16.11■□□□□ 0.17
C4BPAP04003 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.11■□□□□ 0.17
C4BPAP04003 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.11■□□□□ 0.17
C4BPAP04003 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.11■□□□□ 0.17
C4BPAP04003 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 AC232323.1-201ENST00000540724 2099 ntBASIC16.11■□□□□ 0.17
C4BPAP04003 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C4BPAP04003 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms