Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV3P03979 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV3P03979 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
TRGV3P03979 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV3P03979 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 AC104457.1-201ENST00000401024 814 ntBASIC11.94□□□□□ -0.5
TRGV3P03979 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
TRGV3P03979 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV3P03979 INE1-201ENST00000456273 945 ntBASIC11.94□□□□□ -0.5
TRGV3P03979 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV3P03979 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
TRGV3P03979 TDH-203ENST00000531764 1110 ntBASIC11.94□□□□□ -0.5
TRGV3P03979 PTP4A1P2-201ENST00000546033 454 ntBASIC11.94□□□□□ -0.5
TRGV3P03979 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV3P03979 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 AC010319.3-201ENST00000597028 470 ntBASIC11.94□□□□□ -0.5
TRGV3P03979 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.94□□□□□ -0.5
TRGV3P03979 AC005252.2-201ENST00000624630 1141 ntBASIC11.94□□□□□ -0.5
TRGV3P03979 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV3P03979 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.94□□□□□ -0.5
TRGV3P03979 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
TRGV3P03979 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
TRGV3P03979 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC11.94□□□□□ -0.5
TRGV3P03979 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TRGV3P03979 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
TRGV3P03979 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 AL359258.3-201ENST00000622910 2331 ntBASIC11.93□□□□□ -0.5
TRGV3P03979 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 LRRC59-203ENST00000576448 1531 ntBASIC11.93□□□□□ -0.5
TRGV3P03979 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
TRGV3P03979 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
TRGV3P03979 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 AC007389.4-201ENST00000454674 793 ntBASIC11.93□□□□□ -0.5
TRGV3P03979 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC11.93□□□□□ -0.5
TRGV3P03979 RN7SL837P-201ENST00000463010 287 ntBASIC11.93□□□□□ -0.5
TRGV3P03979 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
TRGV3P03979 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC11.93□□□□□ -0.5
TRGV3P03979 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
TRGV3P03979 ATF5-205ENST00000600336 682 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms