Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TNFP01375 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 TLE1P1-201ENST00000422965 589 ntBASIC14.68□□□□□ -0.06
TNFP01375 FNTAP2-201ENST00000430308 634 ntBASIC14.68□□□□□ -0.06
TNFP01375 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 EIF4HP1-201ENST00000453115 687 ntBASIC14.68□□□□□ -0.06
TNFP01375 SERPINA13P-202ENST00000478994 924 ntBASIC14.68□□□□□ -0.06
TNFP01375 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFP01375 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFP01375 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFP01375 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.68□□□□□ -0.06
TNFP01375 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC14.68□□□□□ -0.06
TNFP01375 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TNFP01375 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC14.68□□□□□ -0.06
TNFP01375 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.68□□□□□ -0.06
TNFP01375 AL451050.2-201ENST00000606967 682 ntBASIC14.68□□□□□ -0.06
TNFP01375 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.68□□□□□ -0.06
TNFP01375 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 SNX12-206ENST00000622259 661 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 KRT8P29-201ENST00000420409 1371 ntBASIC14.68□□□□□ -0.06
TNFP01375 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
TNFP01375 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.68□□□□□ -0.06
TNFP01375 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
TNFP01375 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TNFP01375 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 REXO1L2P-201ENST00000425429 2069 ntBASIC14.67□□□□□ -0.06
TNFP01375 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TNFP01375 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 RN7SKP230-201ENST00000365642 335 ntBASIC14.67□□□□□ -0.06
TNFP01375 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFP01375 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFP01375 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC14.67□□□□□ -0.06
TNFP01375 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFP01375 AC100827.2-201ENST00000563214 1194 ntBASIC14.67□□□□□ -0.06
TNFP01375 AC005730.2-201ENST00000564549 1184 ntBASIC14.67□□□□□ -0.06
TNFP01375 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.67□□□□□ -0.06
TNFP01375 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TNFP01375 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.67□□□□□ -0.06
TNFP01375 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TNFP01375 SHC1P1-201ENST00000425230 1745 ntBASIC14.66□□□□□ -0.06
TNFP01375 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFP01375 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
TNFP01375 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.66□□□□□ -0.06
TNFP01375 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.66□□□□□ -0.06
TNFP01375 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TNFP01375 AL162727.3-201ENST00000635661 2787 ntBASIC14.66□□□□□ -0.06
TNFP01375 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms