Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNOT4O95628 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CNOT4O95628 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.51□□□□□ -0.25
CNOT4O95628 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.51□□□□□ -0.25
CNOT4O95628 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CNOT4O95628 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CNOT4O95628 KRT8P14-201ENST00000414254 1442 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
CNOT4O95628 KRT8P35-201ENST00000483942 1338 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.5□□□□□ -0.25
CNOT4O95628 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 AC092933.1-201ENST00000393644 945 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 C2orf27AP3-201ENST00000434123 579 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 ACTBP11-201ENST00000436287 1126 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC13.5□□□□□ -0.25
CNOT4O95628 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.5□□□□□ -0.25
CNOT4O95628 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 AL354718.3-201ENST00000616414 581 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 CR382287.1-201ENST00000623954 586 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.5□□□□□ -0.25
CNOT4O95628 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 AC138969.2-201ENST00000532739 9932 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC13.5□□□□□ -0.25
CNOT4O95628 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CNOT4O95628 AC099063.4-201ENST00000641099 1602 ntBASIC13.5□□□□□ -0.25
CNOT4O95628 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CNOT4O95628 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 AC073347.1-201ENST00000421633 2643 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 ANKRD19P-201ENST00000338192 862 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CNOT4O95628 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CNOT4O95628 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CNOT4O95628 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CNOT4O95628 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.49□□□□□ -0.25
CNOT4O95628 KLF2P2-201ENST00000416807 1039 ntBASIC13.49□□□□□ -0.25
CNOT4O95628 RPL28-203ENST00000428193 573 ntTSL 2 BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms