Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 MTX1P1-201ENST00000440904 838 ntBASIC17.95■□□□□ 0.46
MBD4O95243 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 RPSAP36-202ENST00000494591 1261 ntBASIC17.95■□□□□ 0.46
MBD4O95243 AC108725.1-201ENST00000495472 409 ntBASIC17.95■□□□□ 0.46
MBD4O95243 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MBD4O95243 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.95■□□□□ 0.46
MBD4O95243 DERL2-202ENST00000570848 657 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD4O95243 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC17.95■□□□□ 0.46
MBD4O95243 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MBD4O95243 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC17.95■□□□□ 0.46
MBD4O95243 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
MBD4O95243 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
MBD4O95243 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
MBD4O95243 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MBD4O95243 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD4O95243 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MBD4O95243 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
MBD4O95243 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD4O95243 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 AL136309.1-201ENST00000403917 691 ntBASIC17.94■□□□□ 0.46
MBD4O95243 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.94■□□□□ 0.46
MBD4O95243 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
MBD4O95243 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC17.94■□□□□ 0.46
MBD4O95243 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.94■□□□□ 0.46
MBD4O95243 CICP23-201ENST00000605013 2741 ntBASIC17.94■□□□□ 0.46
MBD4O95243 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.94■□□□□ 0.46
MBD4O95243 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
MBD4O95243 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 SALL4P5-201ENST00000419001 1760 ntBASIC17.94■□□□□ 0.46
MBD4O95243 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
MBD4O95243 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
MBD4O95243 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD4O95243 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MBD4O95243 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 AC015818.8-201ENST00000587907 1519 ntBASIC17.93■□□□□ 0.46
MBD4O95243 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
MBD4O95243 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD4O95243 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.93■□□□□ 0.46
MBD4O95243 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
MBD4O95243 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC17.93■□□□□ 0.46
MBD4O95243 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD4O95243 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD4O95243 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC17.93■□□□□ 0.46
MBD4O95243 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC17.93■□□□□ 0.46
MBD4O95243 KLK3-211ENST00000597483 810 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD4O95243 AC091271.1-201ENST00000611877 1162 ntBASIC17.93■□□□□ 0.46
MBD4O95243 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD4O95243 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 NID2-208ENST00000617139 3827 ntTSL 5 BASIC17.93■□□□□ 0.46
MBD4O95243 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC17.93■□□□□ 0.46
MBD4O95243 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
MBD4O95243 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.92■□□□□ 0.46
MBD4O95243 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms