Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
CSPG5O95196 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.25■□□□□ 0.19
CSPG5O95196 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 AC007787.1-201ENST00000588095 1583 ntBASIC16.25■□□□□ 0.19
CSPG5O95196 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.25■□□□□ 0.19
CSPG5O95196 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.25■□□□□ 0.19
CSPG5O95196 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
CSPG5O95196 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
CSPG5O95196 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.24■□□□□ 0.19
CSPG5O95196 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSPG5O95196 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.24■□□□□ 0.19
CSPG5O95196 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.24■□□□□ 0.19
CSPG5O95196 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSPG5O95196 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC16.24■□□□□ 0.19
CSPG5O95196 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.24■□□□□ 0.19
CSPG5O95196 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.24■□□□□ 0.19
CSPG5O95196 AC012618.1-201ENST00000461223 412 ntBASIC16.24■□□□□ 0.19
CSPG5O95196 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.24■□□□□ 0.19
CSPG5O95196 PRKXP1-201ENST00000561423 1122 ntBASIC16.24■□□□□ 0.19
CSPG5O95196 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.24■□□□□ 0.19
CSPG5O95196 RN7SL774P-201ENST00000577467 290 ntBASIC16.24■□□□□ 0.19
CSPG5O95196 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 AC004466.1-201ENST00000599515 1080 ntBASIC16.24■□□□□ 0.19
CSPG5O95196 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 AL353726.2-201ENST00000623259 884 ntBASIC16.24■□□□□ 0.19
CSPG5O95196 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
CSPG5O95196 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
CSPG5O95196 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
CSPG5O95196 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.23■□□□□ 0.19
CSPG5O95196 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG5O95196 AC055811.4-201ENST00000624039 1754 ntBASIC16.23■□□□□ 0.19
CSPG5O95196 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
CSPG5O95196 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG5O95196 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG5O95196 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 MPV17-204ENST00000399052 749 ntTSL 4 BASIC16.23■□□□□ 0.19
CSPG5O95196 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG5O95196 RGS5-214ENST00000429865 754 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG5O95196 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.23■□□□□ 0.19
CSPG5O95196 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG5O95196 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC16.23■□□□□ 0.19
CSPG5O95196 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.23■□□□□ 0.19
CSPG5O95196 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.23■□□□□ 0.19
CSPG5O95196 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
CSPG5O95196 AP002414.2-201ENST00000591780 3365 ntBASIC16.23■□□□□ 0.19
CSPG5O95196 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms