Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CLOCKO15516 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
CLOCKO15516 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CLOCKO15516 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC14.46□□□□□ -0.09
CLOCKO15516 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.46□□□□□ -0.09
CLOCKO15516 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CLOCKO15516 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.46□□□□□ -0.09
CLOCKO15516 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CLOCKO15516 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLOCKO15516 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.46□□□□□ -0.09
CLOCKO15516 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 AC142381.1-201ENST00000426099 345 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC14.46□□□□□ -0.09
CLOCKO15516 RBPMS2P1-201ENST00000437762 623 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.46□□□□□ -0.09
CLOCKO15516 CNN2P2-201ENST00000443536 909 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 CNN2P3-201ENST00000450201 906 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.46□□□□□ -0.09
CLOCKO15516 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.46□□□□□ -0.09
CLOCKO15516 AC092364.2-202ENST00000597012 1073 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 LINC02084-201ENST00000606069 1096 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC14.46□□□□□ -0.09
CLOCKO15516 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 AL136317.3-201ENST00000618497 906 ntBASIC14.46□□□□□ -0.09
CLOCKO15516 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLOCKO15516 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CLOCKO15516 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.46□□□□□ -0.09
CLOCKO15516 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CLOCKO15516 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CLOCKO15516 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
CLOCKO15516 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLOCKO15516 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLOCKO15516 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
CLOCKO15516 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLOCKO15516 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLOCKO15516 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLOCKO15516 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CLOCKO15516 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CLOCKO15516 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.46□□□□□ -0.1
CLOCKO15516 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
CLOCKO15516 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 AC089987.1-201ENST00000551654 2209 ntBASIC14.45□□□□□ -0.1
CLOCKO15516 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC14.45□□□□□ -0.1
CLOCKO15516 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.45□□□□□ -0.1
CLOCKO15516 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.45□□□□□ -0.1
CLOCKO15516 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 AC067863.1-201ENST00000494933 530 ntBASIC14.45□□□□□ -0.1
CLOCKO15516 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.45□□□□□ -0.1
CLOCKO15516 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 AC015802.1-201ENST00000588104 1449 ntBASIC14.45□□□□□ -0.1
CLOCKO15516 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.45□□□□□ -0.1
CLOCKO15516 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.45□□□□□ -0.1
CLOCKO15516 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CLOCKO15516 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CLOCKO15516 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CLOCKO15516 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.45□□□□□ -0.1
CLOCKO15516 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms