Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC19.83■□□□□ 0.76
APAF1O14727 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 AC140479.7-201ENST00000636301 2332 ntBASIC19.82■□□□□ 0.76
APAF1O14727 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC19.82■□□□□ 0.76
APAF1O14727 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.82■□□□□ 0.76
APAF1O14727 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.82■□□□□ 0.76
APAF1O14727 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
APAF1O14727 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
APAF1O14727 MX1-218ENST00000619682 1980 ntTSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 FES-203ENST00000394302 2133 ntTSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
APAF1O14727 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC19.82■□□□□ 0.76
APAF1O14727 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC19.82■□□□□ 0.76
APAF1O14727 USP28-214ENST00000545540 3431 ntTSL 2 BASIC19.82■□□□□ 0.76
APAF1O14727 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
APAF1O14727 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
APAF1O14727 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 AL138725.1-201ENST00000407347 1314 ntBASIC19.81■□□□□ 0.76
APAF1O14727 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 TPM3P8-201ENST00000330554 643 ntBASIC19.81■□□□□ 0.76
APAF1O14727 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC19.81■□□□□ 0.76
APAF1O14727 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
APAF1O14727 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC19.81■□□□□ 0.76
APAF1O14727 HILS1-202ENST00000545329 423 ntBASIC19.81■□□□□ 0.76
APAF1O14727 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC19.81■□□□□ 0.76
APAF1O14727 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC19.81■□□□□ 0.76
APAF1O14727 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 AC011840.2-201ENST00000563063 1520 ntBASIC19.81■□□□□ 0.76
APAF1O14727 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
APAF1O14727 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.8■□□□□ 0.76
APAF1O14727 SALL4P5-201ENST00000419001 1760 ntBASIC19.8■□□□□ 0.76
APAF1O14727 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC19.8■□□□□ 0.76
APAF1O14727 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
APAF1O14727 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC19.8■□□□□ 0.76
APAF1O14727 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC19.8■□□□□ 0.76
APAF1O14727 MIR1909-201ENST00000411312 80 ntBASIC19.8■□□□□ 0.76
APAF1O14727 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC19.8■□□□□ 0.76
APAF1O14727 KRT43P-201ENST00000434019 910 ntBASIC19.8■□□□□ 0.76
APAF1O14727 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC19.8■□□□□ 0.76
APAF1O14727 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.8■□□□□ 0.76
APAF1O14727 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC19.8■□□□□ 0.76
APAF1O14727 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC19.8■□□□□ 0.76
APAF1O14727 RPL28-206ENST00000558752 671 ntTSL 3 BASIC19.8■□□□□ 0.76
APAF1O14727 RAB43P1-201ENST00000561790 589 ntBASIC19.8■□□□□ 0.76
APAF1O14727 APRT-204ENST00000563655 709 ntTSL 5 BASIC19.8■□□□□ 0.76
APAF1O14727 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC19.8■□□□□ 0.76
APAF1O14727 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC19.8■□□□□ 0.76
APAF1O14727 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC19.8■□□□□ 0.76
APAF1O14727 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
APAF1O14727 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC19.8■□□□□ 0.76
APAF1O14727 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
APAF1O14727 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC19.8■□□□□ 0.76
APAF1O14727 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms