Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 AC091812.3-201ENST00000621362 345 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 AL805961.1-203ENST00000641078 1258 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 Z98259.2-201ENST00000641583 609 ntBASIC13.15□□□□□ -0.3
MBD3L3A6NE82 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC13.15□□□□□ -0.3
MBD3L3A6NE82 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.31
MBD3L3A6NE82 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.31
MBD3L3A6NE82 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
MBD3L3A6NE82 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
MBD3L3A6NE82 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 PAUPAR-201ENST00000630360 2965 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 AC007292.2-201ENST00000593524 1812 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 AC138035.3-201ENST00000622706 2791 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 KLF2P1-201ENST00000447438 1042 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 RN7SL11P-201ENST00000471305 293 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CU633904.3-201ENST00000624042 1029 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 PPT1-215ENST00000641471 2368 ntBASIC13.14□□□□□ -0.31
MBD3L3A6NE82 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
MBD3L3A6NE82 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 AL109954.1-202ENST00000564051 2148 ntBASIC13.13□□□□□ -0.31
MBD3L3A6NE82 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.13□□□□□ -0.31
MBD3L3A6NE82 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 Z97180.1-201ENST00000445173 988 ntBASIC13.13□□□□□ -0.31
MBD3L3A6NE82 UPF3AP2-201ENST00000457924 1132 ntBASIC13.13□□□□□ -0.31
MBD3L3A6NE82 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.13□□□□□ -0.31
MBD3L3A6NE82 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.13□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms