Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 HNRNPA1P27-201ENST00000412087 955 ntBASIC21.95■■□□□ 1.1
HFM1A2PYH4 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 SCARNA21-201ENST00000517026 139 ntBASIC21.95■■□□□ 1.1
HFM1A2PYH4 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
HFM1A2PYH4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
HFM1A2PYH4 CICP24-201ENST00000605464 2705 ntBASIC21.95■■□□□ 1.1
HFM1A2PYH4 AC144522.1-201ENST00000625111 1658 ntBASIC21.94■■□□□ 1.1
HFM1A2PYH4 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 USP35-204ENST00000530267 2419 ntTSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 AL596276.2-201ENST00000447525 331 ntBASIC21.94■■□□□ 1.1
HFM1A2PYH4 IGHJ2P-201ENST00000454480 60 ntBASIC21.94■■□□□ 1.1
HFM1A2PYH4 OARD1-204ENST00000464633 717 ntTSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 AC125604.1-201ENST00000496255 707 ntBASIC21.94■■□□□ 1.1
HFM1A2PYH4 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.94■■□□□ 1.1
HFM1A2PYH4 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
HFM1A2PYH4 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 OR2R1P-201ENST00000441404 914 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 IGHVIII-5-2-201ENST00000522505 261 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC027237.1-201ENST00000560942 655 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 NDUFV2P1-201ENST00000596415 907 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC009884.2-201ENST00000603110 324 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 AL157813.1-201ENST00000612996 587 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC133540.1-201ENST00000620845 1019 ntBASIC21.93■■□□□ 1.1
HFM1A2PYH4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 FAS-202ENST00000352159 1722 ntTSL 5 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
HFM1A2PYH4 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC21.93■■□□□ 1.1
HFM1A2PYH4 AC136759.1-202ENST00000530858 2194 ntBASIC21.92■■□□□ 1.1
HFM1A2PYH4 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
HFM1A2PYH4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
HFM1A2PYH4 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms