Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 MRPL3P1-201ENST00000400109 1033 ntBASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 AC004241.5-201ENST00000623870 2448 ntBASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 DDC-213ENST00000617822 1809 ntTSL 3 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TCRBV3S1A0A5B6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.15
TCRBV3S1A0A5B6 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.15
TCRBV3S1A0A5B6 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC14.15□□□□□ -0.15
TCRBV3S1A0A5B6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC005562.1-201ENST00000583030 3219 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC111170.3-201ENST00000624282 2464 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 FAM58CP-201ENST00000435741 640 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC025048.3-201ENST00000590609 569 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC018529.1-201ENST00000613063 361 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC005702.4-201ENST00000618393 416 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC055717.3-201ENST00000622967 595 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC011840.2-201ENST00000563063 1520 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AL137783.1-201ENST00000623494 1896 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC090643.2-201ENST00000623442 2029 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 AC083964.2-201ENST00000623988 2396 ntBASIC14.14□□□□□ -0.15
TCRBV3S1A0A5B6 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
TCRBV3S1A0A5B6 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms