Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC38.99■■■■□ 3.83
BIVM-ERCC5R4GMW8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC38.98■■■■□ 3.83
BIVM-ERCC5R4GMW8 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC38.98■■■■□ 3.83
BIVM-ERCC5R4GMW8 STK32C-205ENST00000456004 607 ntTSL 2 BASIC38.98■■■■□ 3.83
BIVM-ERCC5R4GMW8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC38.97■■■■□ 3.83
BIVM-ERCC5R4GMW8 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC38.97■■■■□ 3.83
BIVM-ERCC5R4GMW8 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC38.96■■■■□ 3.83
BIVM-ERCC5R4GMW8 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC38.96■■■■□ 3.83
BIVM-ERCC5R4GMW8 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC38.96■■■■□ 3.83
BIVM-ERCC5R4GMW8 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC38.96■■■■□ 3.83
BIVM-ERCC5R4GMW8 CA15P2-201ENST00000611168 834 ntBASIC38.96■■■■□ 3.83
BIVM-ERCC5R4GMW8 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 MAG-206ENST00000597035 542 ntTSL 4 BASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 MIR6821-201ENST00000617625 74 ntBASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC38.95■■■■□ 3.83
BIVM-ERCC5R4GMW8 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC38.94■■■■□ 3.82
BIVM-ERCC5R4GMW8 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC38.94■■■■□ 3.82
BIVM-ERCC5R4GMW8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC38.94■■■■□ 3.82
BIVM-ERCC5R4GMW8 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 REST-206ENST00000612429 1376 ntTSL 5 BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 REST-207ENST00000616975 1370 ntTSL 5 BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 SYT6-210ENST00000641643 1587 ntBASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC38.93■■■■□ 3.82
BIVM-ERCC5R4GMW8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 AL138724.1-201ENST00000606771 1088 ntBASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 RASA4CP-201ENST00000424092 1398 ntBASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 HYI-206ENST00000372434 1025 ntTSL 5 BASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC38.92■■■■□ 3.82
BIVM-ERCC5R4GMW8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 AC097381.1-201ENST00000429019 1296 ntBASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC38.91■■■■□ 3.82
BIVM-ERCC5R4GMW8 AC099791.2-201ENST00000605725 427 ntBASIC38.9■■■■□ 3.82
BIVM-ERCC5R4GMW8 AC009102.2-201ENST00000606772 1639 ntBASIC38.9■■■■□ 3.82
BIVM-ERCC5R4GMW8 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC38.9■■■■□ 3.82
BIVM-ERCC5R4GMW8 CD37-213ENST00000598095 1598 ntTSL 2 BASIC38.9■■■■□ 3.82
BIVM-ERCC5R4GMW8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC38.9■■■■□ 3.82
BIVM-ERCC5R4GMW8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 AC092171.4-201ENST00000609130 632 ntBASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 SLC6A10P-202ENST00000431994 2058 ntBASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC38.89■■■■□ 3.82
BIVM-ERCC5R4GMW8 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC38.88■■■■□ 3.82
BIVM-ERCC5R4GMW8 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC38.88■■■■□ 3.81
BIVM-ERCC5R4GMW8 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
BIVM-ERCC5R4GMW8 AC136469.2-201ENST00000623944 1028 ntBASIC38.88■■■■□ 3.81
BIVM-ERCC5R4GMW8 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC38.88■■■■□ 3.81
BIVM-ERCC5R4GMW8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
BIVM-ERCC5R4GMW8 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC38.87■■■■□ 3.81
BIVM-ERCC5R4GMW8 AC006455.2-201ENST00000429931 906 ntBASIC38.87■■■■□ 3.81
BIVM-ERCC5R4GMW8 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC38.87■■■■□ 3.81
BIVM-ERCC5R4GMW8 ANKRD20A6P-201ENST00000618763 204 ntBASIC38.87■■■■□ 3.81
BIVM-ERCC5R4GMW8 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC38.87■■■■□ 3.81
BIVM-ERCC5R4GMW8 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC38.86■■■■□ 3.81
BIVM-ERCC5R4GMW8 AC092666.2-201ENST00000613287 246 ntBASIC38.85■■■■□ 3.81
BIVM-ERCC5R4GMW8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC38.85■■■■□ 3.81
BIVM-ERCC5R4GMW8 AL121749.1-202ENST00000609313 2153 ntBASIC38.85■■■■□ 3.81
BIVM-ERCC5R4GMW8 DUSP8P4-201ENST00000399538 1761 ntBASIC38.85■■■■□ 3.81
BIVM-ERCC5R4GMW8 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC38.85■■■■□ 3.81
BIVM-ERCC5R4GMW8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC38.84■■■■□ 3.81
BIVM-ERCC5R4GMW8 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC38.84■■■■□ 3.81
BIVM-ERCC5R4GMW8 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC38.84■■■■□ 3.81
BIVM-ERCC5R4GMW8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC38.84■■■■□ 3.81
BIVM-ERCC5R4GMW8 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC38.84■■■■□ 3.81
BIVM-ERCC5R4GMW8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC38.83■■■■□ 3.81
BIVM-ERCC5R4GMW8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC38.83■■■■□ 3.81
BIVM-ERCC5R4GMW8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
BIVM-ERCC5R4GMW8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC38.82■■■■□ 3.81
BIVM-ERCC5R4GMW8 PLD4-205ENST00000553861 667 ntTSL 2 BASIC38.82■■■■□ 3.81
BIVM-ERCC5R4GMW8 AC087623.3-201ENST00000607047 1098 ntBASIC38.82■■■■□ 3.81
BIVM-ERCC5R4GMW8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC38.82■■■■□ 3.81
BIVM-ERCC5R4GMW8 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.81
BIVM-ERCC5R4GMW8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC38.82■■■■□ 3.8
BIVM-ERCC5R4GMW8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC38.81■■■■□ 3.8
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms