Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
PCDHGA11Q9Y5H2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 BEX3-202ENST00000372634 753 ntTSL 2 BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 PVT1_1.1-201ENST00000615125 194 ntBASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
PCDHGA11Q9Y5H2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 AL161729.1-201ENST00000604104 1402 ntBASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PCDHGA11Q9Y5H2 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PCDHGA11Q9Y5H2 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 KRT18P24-201ENST00000344739 1156 ntBASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PCDHGA11Q9Y5H2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGA11Q9Y5H2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGA11Q9Y5H2 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PCDHGA11Q9Y5H2 AC120024.1-201ENST00000562672 995 ntBASIC22.2■■□□□ 1.14
PCDHGA11Q9Y5H2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PCDHGA11Q9Y5H2 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 MIR4508-201ENST00000584178 70 ntBASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 THA1P-201ENST00000590384 1145 ntBASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 ABCB10P4-201ENST00000566803 2184 ntBASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PCDHGA11Q9Y5H2 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 AL022069.1-201ENST00000568025 1636 ntBASIC22.17■■□□□ 1.14
PCDHGA11Q9Y5H2 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA11Q9Y5H2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA11Q9Y5H2 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
PCDHGA11Q9Y5H2 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
PCDHGA11Q9Y5H2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.16■■□□□ 1.14
PCDHGA11Q9Y5H2 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms