Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 GCSHP5-201ENST00000443090 522 ntBASIC9.77□□□□□ -0.85
MACF1Q9UPN3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
MACF1Q9UPN3 AC005703.6-201ENST00000623265 1329 ntBASIC9.77□□□□□ -0.85
MACF1Q9UPN3 UNC93B4-201ENST00000505679 747 ntBASIC9.76□□□□□ -0.85
MACF1Q9UPN3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 AC211429.1-201ENST00000415277 523 ntBASIC9.76□□□□□ -0.85
MACF1Q9UPN3 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 KRT18P21-201ENST00000515767 1272 ntBASIC9.76□□□□□ -0.85
MACF1Q9UPN3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
MACF1Q9UPN3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 SNX5-217ENST00000606557 1087 ntBASIC9.75□□□□□ -0.85
MACF1Q9UPN3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC9.75□□□□□ -0.85
MACF1Q9UPN3 MIR6084-201ENST00000622012 110 ntBASIC9.75□□□□□ -0.85
MACF1Q9UPN3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 MIR663A-201ENST00000385250 93 ntBASIC9.74□□□□□ -0.85
MACF1Q9UPN3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 AC098934.4-201ENST00000564127 592 ntBASIC9.74□□□□□ -0.85
MACF1Q9UPN3 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC9.74□□□□□ -0.85
MACF1Q9UPN3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 MIR6722-201ENST00000617286 78 ntBASIC9.73□□□□□ -0.85
MACF1Q9UPN3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 AP005435.1-201ENST00000529293 1178 ntBASIC9.73□□□□□ -0.85
MACF1Q9UPN3 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 CCDC92B-201ENST00000575506 885 ntBASIC9.73□□□□□ -0.85
MACF1Q9UPN3 AL354811.1-201ENST00000610286 706 ntBASIC9.73□□□□□ -0.85
MACF1Q9UPN3 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
MACF1Q9UPN3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 AL050303.2-201ENST00000619798 666 ntBASIC9.72□□□□□ -0.85
MACF1Q9UPN3 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 WWOX-218ENST00000627394 894 ntTSL 5 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC9.72□□□□□ -0.85
MACF1Q9UPN3 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms