Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.28■□□□□ 0.68
UBQLN2Q9UHD9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
UBQLN2Q9UHD9 LINC00273-201ENST00000539813 1452 ntBASIC19.27■□□□□ 0.67
UBQLN2Q9UHD9 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
UBQLN2Q9UHD9 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
UBQLN2Q9UHD9 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
UBQLN2Q9UHD9 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
UBQLN2Q9UHD9 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 LINC01971-201ENST00000617888 1048 ntBASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
UBQLN2Q9UHD9 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN2Q9UHD9 AC092667.1-201ENST00000434301 2586 ntBASIC19.23■□□□□ 0.67
UBQLN2Q9UHD9 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
UBQLN2Q9UHD9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
UBQLN2Q9UHD9 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
UBQLN2Q9UHD9 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 DUX4L11-201ENST00000611504 1267 ntBASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 DUX4L12-201ENST00000614593 1267 ntBASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 DUX4L14-201ENST00000621227 1267 ntBASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
UBQLN2Q9UHD9 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
UBQLN2Q9UHD9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
UBQLN2Q9UHD9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms