Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.84■■□□□ 1.41
PPARGC1AQ9UBK2 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.84■■□□□ 1.41
PPARGC1AQ9UBK2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
PPARGC1AQ9UBK2 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
PPARGC1AQ9UBK2 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 HES6-204ENST00000409182 863 ntTSL 2 BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 TRIR-205ENST00000592273 783 ntTSL 3 BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
PPARGC1AQ9UBK2 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 OR2A1-AS1-204ENST00000470435 602 ntBASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 PREB-202ENST00000406567 1910 ntTSL 5 BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
PPARGC1AQ9UBK2 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 MIR4787-201ENST00000607364 84 ntBASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 AL139125.2-201ENST00000623134 1869 ntBASIC23.81■■□□□ 1.4
PPARGC1AQ9UBK2 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 AL161729.1-201ENST00000604104 1402 ntBASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PPARGC1AQ9UBK2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 AC131274.2-201ENST00000580697 1507 ntBASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PPARGC1AQ9UBK2 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 AC092028.1-203ENST00000608262 953 ntBASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PPARGC1AQ9UBK2 AL022069.1-201ENST00000568025 1636 ntBASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 CD37-213ENST00000598095 1598 ntTSL 2 BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.77■■□□□ 1.4
PPARGC1AQ9UBK2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 GUSBP5-201ENST00000418136 578 ntBASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PPARGC1AQ9UBK2 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 AC141586.4-201ENST00000624558 1573 ntBASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 AC004448.1-201ENST00000458332 883 ntBASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 LSM7-203ENST00000585409 512 ntTSL 2 BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 SNX5-217ENST00000606557 1087 ntBASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
PPARGC1AQ9UBK2 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms