Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.48■□□□□ 0.87
VSX1Q9NZR4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VSX1Q9NZR4 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
VSX1Q9NZR4 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 AC074183.2-201ENST00000623112 922 ntBASIC20.46■□□□□ 0.87
VSX1Q9NZR4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VSX1Q9NZR4 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 LTK-203ENST00000453182 2412 ntTSL 2 BASIC20.45■□□□□ 0.86
VSX1Q9NZR4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 DUSP8P5-201ENST00000422884 1815 ntBASIC20.44■□□□□ 0.86
VSX1Q9NZR4 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 AL022069.1-201ENST00000568025 1636 ntBASIC20.44■□□□□ 0.86
VSX1Q9NZR4 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
VSX1Q9NZR4 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 TSPY13P-201ENST00000338964 914 ntBASIC20.43■□□□□ 0.86
VSX1Q9NZR4 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 BHLHE23-202ENST00000612929 1109 ntBASIC20.43■□□□□ 0.86
VSX1Q9NZR4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
VSX1Q9NZR4 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX1Q9NZR4 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC20.41■□□□□ 0.86
VSX1Q9NZR4 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
VSX1Q9NZR4 AC120024.1-201ENST00000562672 995 ntBASIC20.4■□□□□ 0.86
VSX1Q9NZR4 AC131274.2-201ENST00000580697 1507 ntBASIC20.4■□□□□ 0.86
VSX1Q9NZR4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms