Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
CDC42SE1Q9NRR8 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
CDC42SE1Q9NRR8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
CDC42SE1Q9NRR8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
CDC42SE1Q9NRR8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
CDC42SE1Q9NRR8 EED-207ENST00000528180 1745 ntTSL 5 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
CDC42SE1Q9NRR8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC11.93□□□□□ -0.5
CDC42SE1Q9NRR8 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC11.92□□□□□ -0.5
CDC42SE1Q9NRR8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms