Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
A1CFQ9NQ94 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
A1CFQ9NQ94 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
A1CFQ9NQ94 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 GATM-206ENST00000558336 1522 ntTSL 2 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 STK32C-205ENST00000456004 607 ntTSL 2 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.34■■□□□ 1.81
A1CFQ9NQ94 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
A1CFQ9NQ94 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC26.33■■□□□ 1.81
A1CFQ9NQ94 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
A1CFQ9NQ94 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
A1CFQ9NQ94 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.33■■□□□ 1.81
A1CFQ9NQ94 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 AL136162.1-201ENST00000607711 1078 ntBASIC26.32■■□□□ 1.8
A1CFQ9NQ94 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC26.32■■□□□ 1.8
A1CFQ9NQ94 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC26.31■■□□□ 1.8
A1CFQ9NQ94 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
A1CFQ9NQ94 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
A1CFQ9NQ94 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
A1CFQ9NQ94 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
A1CFQ9NQ94 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC26.3■■□□□ 1.8
A1CFQ9NQ94 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
A1CFQ9NQ94 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
A1CFQ9NQ94 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
A1CFQ9NQ94 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC26.29■■□□□ 1.8
A1CFQ9NQ94 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
A1CFQ9NQ94 AL031432.3-201ENST00000607698 485 ntBASIC26.29■■□□□ 1.8
A1CFQ9NQ94 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
A1CFQ9NQ94 AL022069.1-201ENST00000568025 1636 ntBASIC26.28■■□□□ 1.8
A1CFQ9NQ94 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 AC135279.3-201ENST00000610945 1311 ntBASIC26.28■■□□□ 1.8
A1CFQ9NQ94 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.28■■□□□ 1.8
A1CFQ9NQ94 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 AC024257.2-201ENST00000549699 147 ntBASIC26.27■■□□□ 1.8
A1CFQ9NQ94 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
A1CFQ9NQ94 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
A1CFQ9NQ94 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
A1CFQ9NQ94 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 EBPL-204ENST00000378272 766 ntTSL 3 BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 SUDS3P1-201ENST00000505831 966 ntBASIC26.24■■□□□ 1.79
A1CFQ9NQ94 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC26.24■■□□□ 1.79
A1CFQ9NQ94 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
A1CFQ9NQ94 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
A1CFQ9NQ94 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC26.23■■□□□ 1.79
A1CFQ9NQ94 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
A1CFQ9NQ94 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
A1CFQ9NQ94 AC142381.2-201ENST00000566120 298 ntBASIC26.23■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms