Protein–RNA interactions for Protein: Q9NQ35

NRIP3, Nuclear receptor-interacting protein 3, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRIP3Q9NQ35 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
NRIP3Q9NQ35 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
NRIP3Q9NQ35 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 BRD4-212ENST00000630599 726 ntTSL 2 BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
NRIP3Q9NQ35 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 ABHD17AP5-201ENST00000580133 923 ntBASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 AC019171.1-201ENST00000601251 1056 ntBASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
NRIP3Q9NQ35 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NRIP3Q9NQ35 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
NRIP3Q9NQ35 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
NRIP3Q9NQ35 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 AC011551.1-201ENST00000614101 683 ntBASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
NRIP3Q9NQ35 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
NRIP3Q9NQ35 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 NTF6A-201ENST00000591175 560 ntBASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
NRIP3Q9NQ35 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 AC022616.5-201ENST00000518796 181 ntBASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
NRIP3Q9NQ35 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NRIP3Q9NQ35 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
NRIP3Q9NQ35 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
NRIP3Q9NQ35 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms