Protein–RNA interactions for Protein: Q9N2K0

HERV-H_2q24.3 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2K0 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Q9N2K0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.23■□□□□ 0.67
Q9N2K0 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Q9N2K0 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Q9N2K0 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Q9N2K0 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.22■□□□□ 0.67
Q9N2K0 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC19.22■□□□□ 0.67
Q9N2K0 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Q9N2K0 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.22■□□□□ 0.67
Q9N2K0 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Q9N2K0 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.21■□□□□ 0.67
Q9N2K0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Q9N2K0 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Q9N2K0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Q9N2K0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.21■□□□□ 0.67
Q9N2K0 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q9N2K0 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC19.21■□□□□ 0.67
Q9N2K0 AL161729.1-201ENST00000604104 1402 ntBASIC19.21■□□□□ 0.67
Q9N2K0 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Q9N2K0 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Q9N2K0 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC19.2■□□□□ 0.66
Q9N2K0 MIR6765-201ENST00000614092 87 ntBASIC19.2■□□□□ 0.66
Q9N2K0 HYI-213ENST00000583037 1322 ntTSL 5 BASIC19.2■□□□□ 0.66
Q9N2K0 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Q9N2K0 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.19■□□□□ 0.66
Q9N2K0 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC19.19■□□□□ 0.66
Q9N2K0 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Q9N2K0 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Q9N2K0 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Q9N2K0 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.19■□□□□ 0.66
Q9N2K0 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC19.19■□□□□ 0.66
Q9N2K0 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q9N2K0 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Q9N2K0 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
Q9N2K0 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.18■□□□□ 0.66
Q9N2K0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
Q9N2K0 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Q9N2K0 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.18■□□□□ 0.66
Q9N2K0 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.17■□□□□ 0.66
Q9N2K0 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.17■□□□□ 0.66
Q9N2K0 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Q9N2K0 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q9N2K0 C9orf163-202ENST00000624034 2573 ntBASIC19.17■□□□□ 0.66
Q9N2K0 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Q9N2K0 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Q9N2K0 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Q9N2K0 DUX4L9-201ENST00000449051 1259 ntBASIC19.17■□□□□ 0.66
Q9N2K0 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.17■□□□□ 0.66
Q9N2K0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q9N2K0 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Q9N2K0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Q9N2K0 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC19.16■□□□□ 0.66
Q9N2K0 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Q9N2K0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
Q9N2K0 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.16■□□□□ 0.66
Q9N2K0 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Q9N2K0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9N2K0 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC19.15■□□□□ 0.66
Q9N2K0 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.15■□□□□ 0.66
Q9N2K0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9N2K0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q9N2K0 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9N2K0 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Q9N2K0 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Q9N2K0 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
Q9N2K0 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Q9N2K0 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Q9N2K0 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.15■□□□□ 0.66
Q9N2K0 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.14■□□□□ 0.66
Q9N2K0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.14■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 109.7 ms