Protein–RNA interactions for Protein: Q9H875

PRKRIP1, PRKR-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKRIP1Q9H875 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 AL161729.1-201ENST00000604104 1402 ntBASIC31.41■■■□□ 2.62
PRKRIP1Q9H875 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PRKRIP1Q9H875 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
PRKRIP1Q9H875 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC31.4■■■□□ 2.62
PRKRIP1Q9H875 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC31.4■■■□□ 2.62
PRKRIP1Q9H875 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 KRT18P24-201ENST00000344739 1156 ntBASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 AC103834.1-201ENST00000520383 144 ntBASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.62
PRKRIP1Q9H875 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 AF131216.4-201ENST00000638924 1588 ntBASIC31.38■■■□□ 2.61
PRKRIP1Q9H875 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 MIR4508-201ENST00000584178 70 ntBASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
PRKRIP1Q9H875 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC31.36■■■□□ 2.61
PRKRIP1Q9H875 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
PRKRIP1Q9H875 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 MIR4281-201ENST00000580852 62 ntBASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 AL022069.1-201ENST00000568025 1636 ntBASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
PRKRIP1Q9H875 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRKRIP1Q9H875 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRKRIP1Q9H875 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRKRIP1Q9H875 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
PRKRIP1Q9H875 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
PRKRIP1Q9H875 LTK-203ENST00000453182 2412 ntTSL 2 BASIC31.33■■■□□ 2.61
PRKRIP1Q9H875 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
PRKRIP1Q9H875 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC31.31■■■□□ 2.6
PRKRIP1Q9H875 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
PRKRIP1Q9H875 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
PRKRIP1Q9H875 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
PRKRIP1Q9H875 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC31.3■■■□□ 2.6
PRKRIP1Q9H875 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
PRKRIP1Q9H875 THA1P-201ENST00000590384 1145 ntBASIC31.29■■■□□ 2.6
PRKRIP1Q9H875 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC31.29■■■□□ 2.6
PRKRIP1Q9H875 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 LBH-205ENST00000407930 756 ntTSL 2 BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
PRKRIP1Q9H875 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC31.27■■■□□ 2.6
PRKRIP1Q9H875 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC31.27■■■□□ 2.6
PRKRIP1Q9H875 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRKRIP1Q9H875 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC31.27■■■□□ 2.6
PRKRIP1Q9H875 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC31.27■■■□□ 2.6
PRKRIP1Q9H875 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
PRKRIP1Q9H875 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms